A Bayesian Nonparametric Topic Model for Microbiome Data Using Subject Attributes
نویسندگان
چکیده
منابع مشابه
A Spatiotemporal Nonparametric Bayesian Model of Multi - Subject Fmri Data
In this paper we propose a unified, probabilistically coherent framework for the analysis of task-related brain activity in multi-subject fMRI experiments. This is distinct from two-stage “group analysis” approaches traditionally considered in the fMRI literature, which separate the inference on the individual fMRI time courses from the inference at the population level. In our modeling approac...
متن کاملTopics Over Nonparametric Time: A Supervised Topic Model Using Bayesian Nonparametric Density Estimation
We propose a new supervised topic model that uses a nonparametric density estimator to model the distribution of real-valued metadata given a topic. The model is similar to Topics Over Time, but replaces the beta distributions used in that model with a Dirichlet process mixture of normals. The use of a nonparametric density estimator allows for the fitting of a greater class of metadata densiti...
متن کاملFor the Paper “ a Spatio - Temporal Nonparametric Bayesian Model of Multi - Subject Fmri Data ”
MCMC algorithm. We describe the MCMC algorithm in detail here. For updating the selection parameters γiν and regression coefficients βiν , i = 1, . . . , N, ν = 1, . . . , V , we first generate number of subjects n from from Poisson distribution with mean parameter N/2, with N the total number of subjects. If 0 < n ≤ N , then we stop and select n subjects with simple random sampling method with...
متن کاملA New Nonparametric Regression for Longitudinal Data
In many area of medical research, a relation analysis between one response variable and some explanatory variables is desirable. Regression is the most common tool in this situation. If we have some assumptions for such normality for response variable, we could use it. In this paper we propose a nonparametric regression that does not have normality assumption for response variable and we focus ...
متن کاملNonparametric Regression Estimation under Kernel Polynomial Model for Unstructured Data
The nonparametric estimation(NE) of kernel polynomial regression (KPR) model is a powerful tool to visually depict the effect of covariates on response variable, when there exist unstructured and heterogeneous data. In this paper we introduce KPR model that is the mixture of nonparametric regression models with bootstrap algorithm, which is considered in a heterogeneous and unstructured framewo...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: IPSJ Transactions on Bioinformatics
سال: 2020
ISSN: 1882-6679
DOI: 10.2197/ipsjtbio.13.1